Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946654.1_cds_XP_016488697.1_79305
CDS Infomation

[gene=LOC107808673] [db_xref=GeneID:107808673] [protein=methyl-CpG-binding domain-containing protein 11-like] [protein_id=XP_016488697.1] [location=join(176819..176881,187428..188876)] [gbkey=CDS]
Sequence

ATGGCGAGCAAGAATGAAGTTGTGTCCGTTGAGCTTCCTGCTCCAGCTGGTTGGAAGAAG
ACGTTTCTGCCTAAGAAAGGAGGAGGGACTCCGAAGAAAAAAGAGATCGTATTTACTGCG
CCAACAGGGGAGGAGATCACTACAAAGAGACAGTTGGAGCAGTACCTGAAGTCACACCCT
GGCAGTCCGCCTATCACGGAGTTTGACTGGGGAACTGGTGAAACTCCAAGAAGATCCTCA
AGAATCAGTGGAAAGGCAAAGGCAGCTCCACCTTCAGCAGAAAGTGAGACTCCAAAAAAG
CGAAGCAGAATATCTTCAGCTTCTAAGAAGGATGTGAAAGACAAAGAAGTCCATGAAGAA
ACAGAGGCGGCAAAGGATGAAAAGGATGTTGACATGCAAGAAGCTGAAAAACATGAAAAG
GATACTCTGTCTGTGGAAGCTGAGAAGGAGGTCGAACAGAAACAGGATGAGGGAAAAGAT
GAAAACAAGGATATGGAGAAAGACGTAGAGAAGAAAGATGAAGTCCAAACTACTGAGGAG
GCTGCAGAGAAGCAAGATGAAATGCATTCTTCTGATGCTGTGAAGGAGAACCAAGCTGCA
AAGGAGAGGGAAGACCGAACTGAAGATGGCAAATCGGAAGATGCTCCATCCAACGTGGCT
GACGTTGAGAAAGATGTCAAAATGGCGGATAATGCTGCGGAGAAGAAAGATGAAATGCAT
TCTTCTACTGTTGATGCTGTGAAGGAGAACCAAGCTGACAAGAAAAGTGAAGGCCAAACT
GAAGATGGCAAAGCAGAAGAAGCAGCTGAGGGTGACAAGGATGTCAAAATGGCAGATAAT
TTTCAACACCCTGAAGATGTTGGAGAGGCATCGGTGGTGAAAGAGGCCATTCTCGAGAAA
GAAGCTGATGTTCCTGAAGCTACTAAGGACGAGGAAGGGAAGGATGTACAAGTTCAAGAA
AGTGTGGAACAGAAACCTACTGAAACAAAGAAAGAGGATCCTAGCGCTGCTGCTTTTGAG
AAAGATGTCAAAATGGCGGATAATGCTGCAGAGAAGAAAGATGAAATTCATTCTTCTAAT
GTTGATGCTGTGAAGGAGAACCAAGCTGACAAGAAAAGTGAAGGCCAAACTGAAGATGGC
AAAGCAGAAGATGCTCCTGCCGAAGCAGCTGAGGGTGACAAAGGTGTCAAAATGGCAGAT
AATTTGGCATCGGTGGTGAAAGAGGCCCCTCTCGAGAAAAAAGCTGATGTTCCTGAAGCT
ACTAAGGATGAGGAAGGGAAGGATGTACAAGTTCAAGAAAGTGTAGAACAGAAACCTGCT
GAAACAAAGAAAGAGGATCCTACCGCTGCTGAGGAAAAGAAGTATCAACCGGAACAAGAA
CAGAGAGGTGAAAATGGTGCAGCAACAAAGAGCACTGGAGATGGAGATGCTTTGATGAAC
AGCGACGTAAGCAAGAAGGTGGAGGAAGAAGTAACTGAAAACGGAATCGAGGCTGATGAG
GCCAACCCTTGA

Peptide Sequence

PEP ID

XP_016488697.1
PEP Infomation

PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Nicotiana tabacum]
Sequence

MASKNEVVSVELPAPAGWKKTFLPKKGGGTPKKKEIVFTAPTGEEITTKRQLEQYLKSHP
GSPPITEFDWGTGETPRRSSRISGKAKAAPPSAESETPKKRSRISSASKKDVKDKEVHEE
TEAAKDEKDVDMQEAEKHEKDTLSVEAEKEVEQKQDEGKDENKDMEKDVEKKDEVQTTEE
AAEKQDEMHSSDAVKENQAAKEREDRTEDGKSEDAPSNVADVEKDVKMADNAAEKKDEMH
SSTVDAVKENQADKKSEGQTEDGKAEEAAEGDKDVKMADNFQHPEDVGEASVVKEAILEK
EADVPEATKDEEGKDVQVQESVEQKPTETKKEDPSAAAFEKDVKMADNAAEKKDEIHSSN
VDAVKENQADKKSEGQTEDGKAEDAPAEAAEGDKGVKMADNLASVVKEAPLEKKADVPEA
TKDEEGKDVQVQESVEQKPAETKKEDPTAAEEKKYQPEQEQRGENGAATKSTGDGDALMN
SDVSKKVEEEVTENGIEADEANP

Transcript Sequence

Gene sequence data has not been registered.